Earthwise,
For me, there are several big issues I have with grain-fed meat. First, they are raised in "concentrated animal feeding operations", basically devoid of grass, clean air, and pasture. I know not everyone can afford to pay the price of grass-fed meat, but I respect animals for the nutrition that they provide me and I would rather not eat meat than to subject animals to an inhumane life. Second, grain is not their natural diet. They pump them full of steroids and antibiotics to get them to market as quick as possible. If they didn't fatten them up and get them to market fast, they would literally die from the diet they are fed. Cows eat grass, hay, clover, etc. not corn, soybeans, oats, unless that's all they have. Third, about 60% of the antibiotics (ABX)used in this country are used for animals. This is an enormous problem on top of how the administer the ABX. When you go to the doctor for a bacterial illness (not viral like the common cold) and your doctor gives you ABX, he is giving you a dose and duration that is meant to kill the organism and then you stop taking them. When they give these ABX to animals, them give them prophylactically, meaning there is nothing wrong with the animal but they want to prevent disease. The doses are lower, and are put directly into the feed. This type of dosing is literally what you would want to do if you wanted to CAUSE antibiotic resistance to increase. It's freaking insanity. Lastly is the the nutrient profile - omega3 vs. omega6. Much closer to 1:1 is what we want, but 2:1, 3:1, 5:1 isn't that bad compared to conventional beef.
There are a lot of reasons to get away from grainfed meat. I personally grew up on a beef cattle farm in Pennsylvania and will never eat grainfed meat. I currently live in salt lake city, UT and get my grass-fed beef from the farmer's market by the pound. Last year we ordered a 1/4 cow and just keep it in the deep freezer. We get all of our eggs locally from a free-range farm, but I'm sure they're supplemented with grain, there really isn't an option. Again, the thing for me is what kind of life did the animal have, and what was it's main source of food - grass, insects, bugs, and of course a little grain.
As for what percentage of the diet must grass to make a difference in the nutrient profile of the meat, I'm not so sure. http://apjcn.nhri.org.tw/server/APJCN/15/1/21.pdf. I found this article for you, but unfortunately I don't have time to read it (I've got an infectious disease final exam tomorrow). I will take a look at it after my exam so maybe I can respond again tomorrow.
The question of the ill effects of grainfed meat being offset by taking Omega3s is an important one. I would first ask why you would want to do that and not just eat grassfed meat? Particularly, when you look at the DHA and EPA concentrations in most Omega3 supplements, they often contain a lot of filler. The more EPA and DHA the better. The problem is the good supplements - Carlson's fish oil, Nordic Naturals, etc. are pretty expensive. You're probably looking at $30-40/month to supplement with EPA and DHA to make up for the lack of Omega3s. I'm not up on the current recommendations by alternative providers like Robb Wolf, but I would not listen to what the mainstream dietetic community tells you as far as recommended Omega3 intake. If you search his website (www.robbwolf.com) and dig into his articles he has some pretty good articles on Omega3s and Omega6s. Another good resource is www.chriskresser.com. Actually, just in a brief search of his website he says increased omega3s isn't enough, you also need to cut down on omega6s (http://chriskresser.com/how-much-omega-3-is-enough-that-depends-on-omega-6/).
I apologize if some of this is jumbled, I'm trying to write this quick so I can get back to studying. Anyway, there are 3 resources I use when looking at nutrition recommendations. First, www.Robbwolf.com. Second, Chris Kresser's website (www.chriskresser.com). Lastly, I like Dr. Peter Attia's website at www.eatingacademy.com. He literally has the best serious of blogs on cholesterol I have ever seen - (http://eatingacademy.com/nutrition/the-straight-dope-on-cholesterol-part-i). I'm grad school now as a physician assistant, but some of Peter's blogs are a must read for the lay person and medical providers so that we don't get caught up in all the hoopla presented in the media.
I'll try to take some more time and get some better answers for you tomorrow or by the end of next week, but keep up the search for some good grassfed sources of meat. Also, if you have a homestead (not sure the size), think about getting some calves and raising them yourself. If you're anywhere near Salt Lake City, I would consider buying 1/4 to a 1/2 a cow from you in the spring!
Adam